- R-2.5.0pat-win32.exeのダウンロード.
- ダウンロードしたR-2.5.0pat-win32.exeを実行
- options(repos)の設定
options(repos=c(CRAN="http://prs.ism.ac.jp/",
CRANextra="http://www.stats.ox.ac.uk/pub/RWin",
Omegahat="http://prs.ism.ac.jp/omegahat/R",
BioCsoft="http://prs.ism.ac.jp/bioc/2.0/bioc",
BioCann="http://prs.ism.ac.jp/bioc/2.0/data/annotation",
BioCexp="http://prs.ism.ac.jp/bioc/2.0/data/experiment",
BioCextra="http://prs.ism.ac.jp/bioc/2.0/extra/"))
- インストールパッケージのリスト入力
list <- c("SSOAP", "genefilter", "SpikeInSubset", "RbcBook1", "MLInterfaces",
"e1071", "sma", "multtest", "kidpack", "xtable", "widgetTools",
"webbioc", "vsn", "tkWidgets", "statmod", "splicegear", "simpleaffy",
"siggenes", "qvalue", "pamr", "ontoTools", "matchprobes", "marray",
"makecdfenv", "hgu95av2", "hexbin", "graph", "gpls", "golubEsets",
"globaltest", "geneplotter", "factDesign", "gcrma", "edd", "ctc",
"daMA", "aws", "convert", "apComplex", "annaffy", "amap", "affylmGUI",
"affyio", "affydata", "affyQCReport", "affyPLM", "affy", "aCGH",
"SparseM", "SNAData", "Ruuid", "Rgraphviz", "Rdbi", "ROC", "RCurl",
"RColorBrewer", "RBGL", "PROcess", "GLAD", "AnnBuilder", "limmaGUI",
"MeasurementError.cor", "Icens", "RSQLite", "XML", "DNAcopy",
"tkrplot", "hgu95av2cdf", "limma", "DynDoc", "Biostrings", "Biobase",
"annotate", "KEGG", "GO")
- パッケージのインストール
install.packages(list)